Prodekanin für Finanzen und Personal, stellvertretende Dekanin

Prof. Dr. Iris Finkemeier
© Uni MS

Finkemeier, Iris, Prof. Dr rer. nat.
Universität Münster
Dekanat des Fachbereichs Biologie
Schlossplatz 4
D-48149 Münster
Tel. +49 (0)251 / 83-2 30 12
dekanat.bio@uni-muenster.de

Wissenschaftlicher Werdegang
Professor, Plant Physiology, Institute for Plant Biology and Biotechnology, 2015 - present
Research Group Leader, Plant Proteomics, Max-Planck-Institute for Plant Breeding Research, Cologne, 2013-2015
Habilitation in Botany, LMU Munich, 2014
Emmy Noether Research Group Leader, Ludwig Maximilians University Munich, 2010-2013
Junior Research Fellow for Biology, Christ Church College, University of Oxford, 2007 – 2011
Feodor-Lynen Research Fellow, Department of Plant Sciences, University of Oxford, 2006 – 2009
Postdoctoral Researcher, Bielefeld University, 2005
PhD in Plant Physiology and Biochemistry, Bielefeld University, 2005
Diploma (equ. to MSc) in Biology, Bielefeld University, 2001


Lehrschwerpunkte
- Plant Physiology and Biochemistry
- Plant Proteomics

Forschungsschwerpunkte
- Mitochondria and Chloroplasts
- Adaptation to abiotic stress
- Metabolite and energy signalling
- Post-translational modifications
- Metabolic pathways
- Plant proteomics

Ausgewählte Projekte
- Exploring the role of lysine acetylation in the regulation of plant metabolism
- Retrograde regulation of plant organellar functions

Publikationen

  • Giese Jonas , Eirich Jürgen , Walther Dirk , Zhang Youjun , Lassowskat Ines , Fernie R. Alisdair , Elsässer Marlene , Maurino G. Veronica , Schwarzländer Markus , Finkemeier Iris. . ‘The interplay of post‐translational protein modifications in Arabidopsis leaves during photosynthesis induction.’ The Plant journal 116, Nr. 4: 1172–1193. doi: 10.1111/tpj.16406.
  • Vogelsang Lara , Eirich Jürgen , Finkemeier Iris , Dietz Karl-Josef. . ‘Specificity and dynamics of H2O2 detoxification by the cytosolic redox regulatory network as revealed by in vitro reconstitution.’ Redox Biology 2024. doi: 10.1016/j.redox.2024.103141.
  • Cosse, Maike; Rehders, Tanja; Eirich, Juergen; Finkemeier, Iris; Selinski, Jennifer. . ‘Cysteine oxidation as a regulatory mechanism of Arabidopsis plastidial NAD-dependent malate dehydrogenase.’ Physiologia Plantarum 176, Nr. 3. doi: 10.1111/ppl.14340.
  • Vogelsang, L.; Eirich, J.; Finkemeier, I.; Dietz, K.-J. . ‘Thiol Redox Proteomics for Identifying Redox-Sensitive Cysteine Residues Within the Protein of Interest During Stress.’ Methods in Molecular Biology 2832: 99–113. doi: 10.1007/978-1-0716-3973-3_7.
  • Eirich Jürgen , Boyer Jean-Baptiste , Armbruster Laura , Ivanauskaite Aiste , Torre La De Carolina , Meinnel Thierry , Wirtz Markus , Mulo Paula , Finkemeier Iris , Giglione Carmela. . ‘Light Changes Promote Distinct Responses of Plastid Protein Acetylation Marks.’ Molecular and Cellular Proteomics 2024. doi: 10.1016/j.mcpro.2024.100845.
  • Brünje Annika, Füßl Magdalena, Eirich Jürgen, Boyer Jean-Baptiste, Heinkow Paulina, Neumann Ulla, Konert Minna, Ivanauskaite Aiste, Seidel Julian, Ozawa Shin-Ichiro, Sakamoto Wataru, Meinnel Thierry, Schwarzer Dirk, Mulo Paula, Giglione Carmela, Finkemeier Iris. . ‘The plastidial protein acetyltransferase GNAT1 forms a complex with GNAT2, yet their interaction is dispensable for state transitions.’ Molecular and Cellular Proteomics 2024. doi: 10.1016/j.mcpro.2024.100850.
  • Balcke, Gerd Ulrich; Vahabi, Khabat; Giese, Jonas ; Finkemeier, Iris; Tissier, Alain. . ‘Coordinated metabolic adaptation of Arabidopsis thaliana to high light.’ The Plant journal n/a. doi: 10.1111/tpj.16992 .
  • Hartmann Philipp , Bohdan Kostiantyn , Hommrich Moritz , Juliá Fabio , Vogelsang Lara , Eirich Jürgen , Zangl Rene , Farès Christophe , Jacobs Beatrice Julia , Mukhopadhyay Dwaipayan , Mengeler Marie Johanna , Vetere Alessandro , Sterling Sophie Marie , Hinrichs Heike , Becker Stefan , Morgner Nina , Schrader Wolfgang , Finkemeier Iris , Dietz Karl-Josef , Griesinger Christian , Ritter Tobias. . ‘Chemoselective umpolung of thiols to episulfoniums for cysteine bioconjugation.’ Nature Chemistry 2023. doi: 10.1038/s41557-023-01388-7.
  • Armbruster Laura , Pożoga Marlena , Wu Zhongshou , Eirich Jürgen , Devendrakumar Thulasi Karen , Torre La De Carolina , Miklánková Pavlina , Huber Monika , Bradic Fabian , Poschet Gernot , Weidenhausen Jonas , Merker Sabine , Ruppert Thomas , Sticht Carsten , Sinning Irmgard , Finkemeier Iris , Li Xin , Hell Rüdiger , Wirtz Markus. . ‘Nα-acetyltransferase NAA50 mediates plant immunity independent of the Nα-acetyltransferase A complex.’ Plant Physiology 2024. doi: 10.1093/plphys/kiae200.
  • Arimura, Shin-Ichi; Finkemeier, Iris; Kühn, Kristina; Takenaka, Mizuki. . ‘Multilayered Regulation of Plastids and Mitochondria.’ Plant and Cell Physiology 64, Nr. 4: 473–476. doi: 10.1093/pcp/pcae036.
  • Sinha Neha , Eirich Jürgen , Finkemeier Iris , Grimm Bernhard. . ‘Glutamate 1-semialdehyde aminotransferase is connected to GluTR by GluTR-binding protein and contributes to the rate-limiting step of 5-aminolevulinic acid synthesis.’ The Plant cell 34. doi: 10.1093/plcell/koac237.
  • Eirich J.; Köhl K.; Jahns P.; Finkemeier I.; Armbruster U.; Kramer D.M.; von Bismarck T.; Korkmaz K.; Ruß J.; Skurk K.; Kaiser E.; Correa Galvis V.; Cruz J.A.; Strand D.D. . ‘Light acclimation interacts with thylakoid ion transport to govern the dynamics of photosynthesis in Arabidopsis.’ New Phytologist 237, Nr. 1: 160–176. doi: 10.1111/nph.18534.
  • Eirich J.; Sindlinger J.; Schön S.; Schwarzer D.; Finkemeier I. . ‘Peptide CoA conjugates for in situ proteomics profiling of acetyltransferase activities.’ Methods in Enzymology 684: 209–252. doi: 10.1016/bs.mie.2022.09.005.
  • Tilak P.; Kotnik F.; Née G.; Seidel J.; Sindlinger J.; Heinkow P.; Eirich J.; Schwarzer D.; Finkemeier I. . ‘Proteome-wide lysine acetylation profiling to investigate the involvement of histone deacetylase HDA5 in the salt stress response of Arabidopsis leaves.’ The Plant journal 115, Nr. 1: 275–292. doi: 10.1111/tpj.16206.
  • Bismarck von Thekla , Korkmaz Kübra , Ruß Jeremy , Skurk Kira , Kaiser Elias , Galvis Correa Viviana , Cruz A. Jeffrey , Strand D. Deserah , Köhl Karin , Eirich Jürgen , Finkemeier Iris , Jahns Peter , Kramer M. David , Armbruster Ute. . ‘Light acclimation interacts with thylakoid ion transport to govern the dynamics of photosynthesis in Arabidopsis.’ New Phytologist 2022. doi: 10.1111/nph.18534.
  • Jethva, Jay; Lichtenauer, Sophie; Schmidt-Schippers, Romy; Steffen-Heins, Anja; Poschet, Gernot; Wirtz, Markus; van Dongen, Joost T.; Eirich, Juergen; Finkemeier, Iris; Bilger, Wolfgang; Schwarzländer, Markus; Sauter, Margret. . ‘Mitochondrial alternative NADH dehydrogenases NDA1 and NDA2 promote survival of reoxygenation stress in Arabidopsis by safeguarding photosynthesis and limiting ROS generation.’ New Phytologist 238, Nr. 1. doi: 10.1111/nph.18657.
  • Länger Marie Zoe , Baur Moritz , Korša Ana , Eirich Jürgen , Lindeza Sofia Ana , Zanchi Caroline , Finkemeier Iris , Kurtz Joachim. . ‘Differential proteome profiling of bacterial culture supernatants reveals candidates for the induction of oral immune priming in the red flour beetle.’ Biology Letters 19, Nr. 11. doi: 10.1098/rsbl.2023.0322.
  • Keller JM; Frieboes MJ; Jödecke L; Kappel S; Wulff N; Rindfleisch T; Sandoval-Ibanez O; Gerlach I; Thiele W; Bock R; Eirich J; Finkemeier I; Schünemann D; Zoschke R; Schöttler MA; Armbruster U. . ‘Eukaryote-specific assembly factor DEAP2 mediates an early step of photosystem II assembly in Arabidopsis.’ Plant Physiology 2023. doi: 10.1093/plphys/kiad446.
  • Ivanauskaite, A.; Rantala, M.; Laihonen, L.; Konert, M.; Schwenner, N.; Mühlenbeck, J.; Finkemeier, I.; Mulo, P. . ‘Loss of Chloroplast GNAT Acetyltransferases Results in Distinct Metabolic Phenotypes in Arabidopsis.’ Plant and Cell Physiology 64, Nr. 5: 549–563. doi: 10.1093/pcp/pcad017.
  • Giese J; Eirich J; Post F; Schwarzländer M; Finkemeier I. . ‘Mass Spectrometry-Based Quantitative Cysteine Redox Proteome Profiling of Isolated Mitochondria Using Differential iodoTMT Labeling.’ Methods in Molecular Biology 2363: 215–234. doi: 10.1007/978-1-0716-1653-6_16.
  • Balparda M, Elsässer M, Badia MB, Giese J, Bovdilova A, Hüdig M, Reinmuth L, Eirich J, Schwarzländer M, Finkemeier I, Schallenberg-Rüdinger M, Maurino VG. . ‘Acetylation of conserved lysines fine-tunes mitochondrial malate dehydrogenase activity in land plants.’ The Plant journal 109, Nr. 1: 92–111. doi: 10.1111/tpj.15556.
  • Lynch T.; Née G.; Chu A.; Krüger T.; Finkemeier I.; Finkelstein R.R. . ‘ABI5 binding protein2 inhibits ABA responses during germination without ABA-INSENSITIVE5 degradation.’ Plant Physiology 189, Nr. 2: 666–678. doi: 10.1093/plphys/kiac096.
  • Leister D.; Kramer K.; Finkemeier I.; Nickelsen J.; Füßl M.; König A.C.; Eirich J.; Hartl M.; Kleinknecht L.; Bohne A.V.; Harzen A. . ‘Dynamic light- and acetate-dependent regulation of the proteome and lysine acetylome of Chlamydomonas.’ The Plant journal 109, Nr. 1: 261–277. doi: 10.1111/tpj.15555.
  • Van Breusegem F.; Meinnel T.; Willems P.; Huesgen P.F.; Finkemeier I.; Graciet E. . ‘Editorial: Plant protein termini: Their generation, modification and function.’ Frontiers in Plant Science 13. doi: 10.3389/fpls.2022.1040392.
  • Sinha N.; Eirich J.; Finkemeier I.; Grimm B. . ‘Glutamate 1-semialdehyde aminotransferase is connected to GluTR by GluTR-binding protein and contributes to the rate-limiting step of 5-aminolevulinic acid synthesis.’ The Plant cell 34, Nr. 11: 4623–4640. doi: 10.1093/plcell/koac237.
  • Sindlinger J.; Schön S.; Eirich J.; Kirchgäßner S.; Finkemeier I.; Schwarzer D. . ‘Investigating Peptide-Coenzyme A Conjugates as Chemical Probes for Proteomic Profiling of N-Terminal and Lysine Acetyltransferases.’ ChemBioChem 23, Nr. 17. doi: 10.1002/cbic.202200255.
  • Nickelsen J.; Bohne A.V.; Neusius D.; Kleinknecht L.; Teh J.T.; Ostermeier M.; Kelterborn S.; Eirich J.; Hegemann P.; Finkemeier I. . ‘Lysine acetylation regulates moonlighting activity of the E2 subunit of the chloroplast pyruvate dehydrogenase complex in Chlamydomonas.’ The Plant journal 111, Nr. 6: 1780–1800. doi: 10.1111/tpj.15924.
  • Giese J.; Eirich J.; Post F.; Schwarzländer M.; Finkemeier I. . ‘Mass Spectrometry–Based Quantitative Cysteine Redox Proteome Profiling of Isolated Mitochondria Using Differential iodoTMT Labeling.’ Methods in Molecular Biology 2363: 215–234. doi: 10.1007/978-1-0716-1653-6_16.
  • Magdalena Füßl, Ann-Christine König, Jürgen Eirich, Markus Hartl, Laura Kleinknecht, Alexandra-Viola Bohne, Anne Harzen, Katharina Kramer, Dario Leister, Jörg Nickelsen, Iris Finkemeier. . ‘Dynamic light‐ and acetate‐dependent regulation of the proteome and lysine acetylome of Chlamydomonas.’ The Plant journal 109, Nr. 1: 261–277. doi: 10.1111/tpj.15555.
  • Neusius D.; Kleinknecht L.; Teh J.T.; Ostermeier M.; Kelterborn S.; Eirich J.; Hegemann P.; Finkemeier I.; Bohne A.V.; Nickelsen J. . ‘Lysine acetylation regulates moonlighting activity of the E2 subunit of the chloroplast pyruvate dehydrogenase complex in Chlamydomonas.’ The Plant journal 111, Nr. 6: 1780–1800. doi: 10.1111/tpj.15924.
  • Zhou H.; Zhang F.; Zhai F.; Su Y.; Zhou Y.; Ge Z.; Tilak P.; Eirich J.; Finkemeier I.; Fu L.; Li Z.; Yang J.; Shen W.; Yuan X.; Xie Y. . ‘Rice GLUTATHIONE PEROXIDASE1-mediated oxidation of bZIP68 positively regulates ABA-independent osmotic stress signaling.’ Molecular Plant 15, Nr. 4: 651–670. doi: 10.1016/j.molp.2021.11.006.
  • Linnenbrügger, L; Doering, L; Lansing, H; Fischer, K; Eirich, J; Finkemeier, I; von Schaewen, A. . ‘Alternative splicing of Arabidopsis G6PD5 recruits NADPH-producing OPPP reactions to the endoplasmic reticulum.’ Frontiers in Plant Science 13: 909624. doi: 10.3389/fpls.2022.909624.
  • Dr. Julia Sindlinger, Stefan Schön, Dr. Jürgen Eirich, Dr. Sören Kirchgäßner, Prof. Dr. Iris Finkemeier, Prof. Dr. Dirk Schwarzer. . ‘Investigating Peptide‐Coenzyme A Conjugates as Chemical Probes for Proteomic Profiling of N‐Terminal and Lysine Acetyltransferases.’ ChemBioChem 23. doi: 10.1002/cbic.202200255.
  • Uflewski M, Mielke S, Corre GV, vo BT, Chen X, Tietz E, Ruß J, Luzarowski M, Sokolowska E, Skirycz A, Eirich J, Finkemeier I, Schöttler MA, Armbruster U. . ‘Functional characterization of protonantiport regulation in the thylakoid membrane.’ Plant Physiology 187. doi: 10.1093/plphys/kiab135.
  • Eirich J.; Skirycz A.; Schöttler M.A.; Finkemeier I.; Armbruster U.; Uflewski M.; Mielke S.; Galvis V.C.; von Bismarck T.; Chen X.; Tietz E.; Ruß J.; Luzarowski M.; Sokolowska E. . ‘Functional characterization of proton antiport regulation in the thylakoid membrane.’ Plant Physiology 187, Nr. 4: 2209–2229. doi: 10.1093/plphys/kiab135.
  • Blanvillain-Baufumé S.; Rzemieniewski J.; Bautor J.; Harzen A.; Menke F.L.H.; Derbyshire P.; Nakagami H.; Finkemeier I.; Parker J.E.; Jones J.D.G.; Sun X.; Lapin D.; Feehan J.M.; Stolze S.C.; Kramer K.; Dongus J.A. . ‘Pathogen effector recognition-dependent association of NRG1 with EDS1 and SAG101 in TNL receptor immunity.’ Nature Communications 12, Nr. 1. doi: 10.1038/s41467-021-23614-x.
  • Rugen N.; Schaarschmidt F.; Eirich J.; Finkemeier I.; Braun H.P.; Eubel H. . ‘Protein interaction patterns in Arabidopsis thaliana leaf mitochondria change in dependence to light.’ Biochimica et Biophysica Acta - Bioenergetics 1862, Nr. 8. doi: 10.1016/j.bbabio.2021.148443.
  • Rose J.; Müller B.; Groscurth S.; Giese J.; Eirich J.; Finkemeier I.; Twyman R.M.; Prüfer D.; Noll G.A. . ‘The functionality of plant mechanoproteins (forisomes) is dependent on the dual role of conserved cysteine residues.’ International Journal of Biological Macromolecules 193: 1332–1339. doi: 10.1016/j.ijbiomac.2021.10.192.
  • Ramundo S.; Mühlenbeck J.S.; Finkemeier I.; Nickelsen J.; Storchová Z.; Wirtz M.; Willmund F.; Räschle M.; Westrich L.D.; Gotsmann V.L.; Herkt C.; Ries F.; Kazek T.; Trösch R.; Armbruster L. . ‘The versatile interactome of chloroplast ribosomes revealed by affinity purification mass spectrometry.’ Nucleic Acids Research 49, Nr. 1: 400–415. doi: 10.1093/nar/gkaa1192.
  • Stitt M.; Daloso D.M.; Fernie A.R.; Finkemeier I.; Zhang Y.; Giese J.; Kerbler S.M.; Siemiatkowska B.; Perez de Souza L.; Alpers J.; Medeiros D.B.; Hincha D.K. . ‘Two mitochondrial phosphatases, PP2c63 and Sal2, are required for posttranslational regulation of the TCA cycle in Arabidopsis.’ Molecular Plant 14, Nr. 7: 1104–1118. doi: 10.1016/j.molp.2021.03.023.
  • Rugen N.; Schaarschmidt F.; Eirich J.; Finkemeier I.; Braun H.P.; Eubel H. . ‘Protein interaction patterns in Arabidopsis thaliana leaf mitochondria change in dependence to light.’ Biochimica et Biophysica Acta - Bioenergetics 1862, Nr. 8. doi: 10.1016/j.bbabio.2021.148443.
  • Rose J.; Müller B.; Groscurth S.; Giese J.; Eirich J.; Finkemeier I.; Twyman R.M.; Prüfer D.; Noll G.A. . ‘The functionality of plant mechanoproteins (forisomes) is dependent on the dual role of conserved cysteine residues.’ International Journal of Biological Macromolecules 193: 1332–1339. doi: 10.1016/j.ijbiomac.2021.10.192.
  • Fuchs P, Rugen N, Carrie C, Elsässer M, Finkemeier I, Giese J, Hildebrandt TM, Kühn K, Maurino VG, Ruberti C, Schallenberg-Rüdinger M, Steinbeck J, Braun HP, Eubel H, Meyer EH, Müller-Schüssele SJ, Schwarzländer M. . ‘Single organelle function and organization as estimated from Arabidopsis mitochondrial proteomics.’ The Plant journal 1. doi: 10.1111/tpj.14534.
  • Armbruster L, Linster E, Boyer J, Brünje A, Eirich J, Stephan I, Bienvenut WV, Weidenhausen J, Meinnel T, Hell R, Sinning I, Finkemeier I, Giglione C, Wirtz M. . ‘NAA50 is an enzymatically active Nα-acetyltransferase that is crucial for development and regulation of stress responses.’ Plant Physiology 183, Nr. 4: 1502–1516. doi: 10.1104/pp.20.00222.
  • Nietzel T, Mostertz J, Ruberti C, Nee G, Fuchs P, Wagner S, Moseler A, Müller-Schüssele SJ, Benamar A, Poschet G, Büttner M, Møller IM, Lillig CH, Macherel D, Wirtz M, Hell R, Finkemeier I, Meyer AJ, Hochgräfe F, Schwarzländer M. . ‘Redox-mediated kick-start of mitochondrial energy metabolism drives resource-efficient seed germination.’ Proceedings of the National Academy of Sciences of the United States of America 117, Nr. 1: 741–751. doi: 10.1073/pnas.1910501117.
  • von Korff M.; Simon R.; Walla A.; Wilma van Esse G.; Kirschner G.K.; Guo G.; Brünje A.; Finkemeier I. . ‘An Acyl-CoA N-Acyltransferase regulates meristem phase change and plant architecture in Barley.’ Plant Physiology 183, Nr. 3: 1088–1109. doi: 10.1104/pp.20.00087.
  • Mulo P.; Koskela M.M.; Brünje A.; Ivanauskaite A.; Lopez L.S.; Schneider D.; DeTar R.A.; Kunz H.H.; Finkemeier I. . ‘Comparative analysis of thylakoid protein complexes in state transition mutants nsi and stn7: focus on PSI and LHCII.’ Photosynthesis Research 145, Nr. 1: 15–30. doi: 10.1007/s11120-020-00711-4.
  • Tsuda K.; Nakagami H.; Nobori T.; Wang Y.; Wu J.; Stolze S.C.; Tsuda Y.; Finkemeier I. . ‘Multidimensional gene regulatory landscape of a bacterial pathogen in plants.’ Nature plants 6, Nr. 7: 883–896. doi: 10.1038/s41477-020-0690-7.
  • Sinning I.; Hell R.; Giglione C.; Finkemeier I.; Wirtz M.; Armbruster L.; Linster E.; Boyer J.B.; Brünje A.; Eirich J.; Stephan I.; Bienvenut W.V.; Weidenhausen J.; Meinnel T. . ‘NAA50 is an enzymatically active Na-acetyltransferase that is crucial for development and regulation of stress responses1[OPEN].’ Plant Physiology 183, Nr. 4: 1502–1516. doi: 10.1104/pp.20.00222.
  • Linster E.; Layer D.; Bienvenut W.V.; Dinh T.V.; Weyer F.A.; Leemhuis W.; Brünje A.; Hoffrichter M.; Miklankova P.; Kopp J.; Lapouge K.; Sindlinger J.; Schwarzer D.; Meinnel T.; Finkemeier I.; Giglione C.; Hell R.; Sinning I.; Wirtz M. . ‘The Arabidopsis Nα-acetyltransferase NAA60 locates to the plasma membrane and is vital for the high salt stress response.’ New Phytologist 228, Nr. 2: 554–569. doi: 10.1111/nph.16747.
  • Bölter B.; Mitterreiter M.J.; Schwenkert S.; Finkemeier I.; Kunz H.H. . ‘The topology of plastid inner envelope potassium cation efflux antiporter KEA1 provides new insights into its regulatory features.’ Photosynthesis Research 145, Nr. 1: 43–54. doi: 10.1007/s11120-019-00700-2.
  • Benninghaus, V.A., Van Deenen, N., Müller, B., Roelfs, K.-U.; Lassowskat, I.; Finkemeier, I.; Prüfer, D.; Gronover, C.S. . ‘Comparative proteome and metabolome analyses of latex-exuding and non-exuding Taraxacum koksaghyz roots provide insights into laticifer biology.’ Journal of Experimental Botany 71, Nr. 4: 1278–1293. doi: 10.1093/jxb/erz512.
  • Giese, J.; Lassowskat, I.; Finkemeier, I. . ‘High-Resolution Lysine Acetylome Profiling by Offline Fractionation and Immunoprecipitation.’ Methods in Molecular Biology 2139: 241–256. doi: 10.1007/978-1-0716-0528-8_18.
  • Née, G.; Tilak, P.; Finkemeier, I. . ‘A Versatile Workflow for the Identification of Protein–Protein Interactions Using GFP-Trap Beads and Mass Spectrometry-Based Label-Free Quantification.’ Methods in Molecular Biology 2139: 257–271. doi: 10.1007/978-1-0716-0528-8_19.
  • Bienvenut WV, Brünje A, Boyer J, Mühlenbeck JS, Bernal G, Lassowskat I, Dian C, Linster E, Dinh TV, Koskela MM, Jung V, Seidel J, Schyrba LK, Ivanauskaite A, Eirich J, Hell R, Schwarzer D, Mulo P, Wirtz M, Meinnel T, Giglione C, Finkemeier I. . ‘Dual lysine and N-terminal acetyltransferases reveal the complexity underpinning protein acetylation.’ Molecular Systems Biology 16, Nr. 7: e9464. doi: 10.15252/msb.20209464.
  • Seidel, J.; Meisinger, T.; Sindlinger, J.; Pieloch, P; Finkemeier, I., Schwarzer, D. . ‘Peptide-Based 2-Aminophenylamide Probes for Targeting Endogenous Class I Histone Deacetylase Complexes.’ ChemBioChem 20, Nr. 24: 3001–3005. doi: 10.1002/cbic.201900339.
  • Niephaus, E.; Müller, B.; van Deenen, N.; Lassowskat, I.; Bonin, M.; Finkemeier, I.; Prüfer, D.; Schulze Gronover, C. . ‘Uncovering mechanisms of rubber biosynthesis in Taraxacum koksaghyz – role of cis-prenyltransferase-like 1 protein.’ The Plant journal 100, Nr. 3: 591–609. doi: 10.1111/tpj.14471.
  • Kim, S.Y.; Harvey, C.M.; Giese, J.; Lassowskat, I.; Singh, S.; Cavanagh, A.; Spalding, M.; Finkemeier, I.; Ort, D.R.; Huber, S.C. . ‘In vivo evidence for a regulatory role of phosphorylation of Arabidopsis Rubisco activase at the Thr78 site.’ Proceedings of the National Academy of Sciences of the United States of America 116, Nr. 37: 18723–18731. doi: 10.1073/pnas.1812916116.
  • Meng, Q.; Gupta, R.; Min, C.W.; Kim, J.; Kramer, K.; Wang, Y.; Park, S.-R.; Finkemeier, I.; Kim, S.T. . ‘A proteomic insight into the MSP1 and flg22 induced signaling in Oryza sativa leaves.’ Journal of Proteomics 196: 120–130. doi: 10.1016/j.jprot.2018.04.015.
  • Uemura, T.; Nakano, R.T.; Takagi, J.; Wang, Y.; Kramer, K.; Finkemeier, I.; Nakagami, H.; Tsuda, K.; Ueda, T.; Schulze-Lefert, P.; Nakano, A. . ‘A golgi-released subpopulation of the trans-golgi network mediates protein secretion in arabidopsis.’ Plant Physiology 179, Nr. 2: 519–532. doi: 10.1104/pp.18.01228.
  • Zhou H., Finkemeier I., Guan W., Tossounian M., Wei B., Young D., Huang J., Messens J., Yang X., Zhu J., Wilson M., Shen W., Xie Y., Foyer C. . ‘Oxidative stress-triggered interactions between the succinyl- and acetyl-proteomes of rice leaves.’ Plant, Cell and Environment 2018, Nr. null. doi: 10.1111/pce.13100. [online first]
  • Finkemeier I, Schwarzländer M. . ‘Mitochondrial regulation in the photosynthetic cell: principles and concepts.’ In Annual Plant Reviews: Plant Mitochondria, edited by Logan DC, 185–226. 2. Aufl. New York City: John Wiley & Sons.
  • Birkenbihl, R.P.; Kracher, B.; Ross, A.; Kramer, K.; Finkemeier, I.; Somssich, I.E. . ‘Principles and characteristics of the Arabidopsis WRKY regulatory network during early MAMP-triggered immunity.’ The Plant journal 96, Nr. 3: 487–502. doi: 10.1111/tpj.14043.
  • Meng, Q.; Gupta, R.; Min, C.W.; Kim, J.; Kramer, K.; Wang, Y.; Park, S.-R.; Finkemeier, I.; Kim, S.T. . ‘Label-free quantitative proteome data associated with MSP1 and flg22 induced signaling in rice leaves.’ Data in Brief 20: 204–209. doi: 10.1016/j.dib.2018.07.063.
  • Koskela, M.M.; Brünje, A.; Ivanauskaite, A.; Grabsztunowicz, M.; Lassowskat, I.; Neumann, U.; Dinh, T.V.; Sindlinger, J.; Schwarzer, D.; Wirtz, M.; Tyystjärvi, E.; Finkemeier, I.; Mulo, P. . ‘Chloroplast acetyltransferase NSI is required for state transitions in arabidopsis Thaliana.’ The Plant cell 30, Nr. 8: 1695–1709. doi: 10.1105/tpc.18.00155.
  • Wozny, D.; Kramer, K.; Finkemeier, I.; Acosta, i.F.; Koornneef, M. . ‘Genes for seed longevity in barley identified by genomic analysis on near isogenic lines.’ Plant, Cell and Environment 41, Nr. 8: 1895–1911. doi: 10.1111/pce.13330.
  • Füßl, M.; Lassowskat, I.; Née, G; Koskela, M.M.; Brünje, A.; Tilak, P.; Giese, J.; Leister, D.; Mulo, P.; Schwarzer, D.; Finkemeier, I. . ‘Beyond histones: New substrate proteins of lysine deacetylases in arabidopsis nuclei.’ Frontiers in Plant Science 9: 461. doi: 10.3389/fpls.2018.00461.
  • Gupta, R.; Min, C.W.; Kramer, K.; Agrawal, G.K.; Rakwal, R.; Park, K.-H.; Wang, Y.; Finkemeier, I.; Kim, S.T. . ‘A Multi-Omics Analysis of Glycine max Leaves Reveals Alteration in Flavonoid and Isoflavonoid Metabolism Upon Ethylene and Abscisic Acid Treatment.’ Proteomics 18, Nr. 7: 1700366. doi: 10.1002/pmic.201700366.
  • Hosp F., Lassowskat I., Santoro V., De Vleesschauwer D., Fliegner D., Redestig H., Mann M., Christian S., Hannah M., Finkemeier I. . ‘Lysine acetylation in mitochondria: From inventory to function.’ Mitochondrion 33, Nr. null: 58–71. doi: 10.1016/j.mito.2016.07.012.
  • Hartl M., Füßl M., Boersema P., Jost J., Kramer K., Bakirbas A., Sindlinger J., Plöchinger M., Leister D., Uhrig G., Moorhead G., Cox J., Salvucci M., Schwarzer D., Mann M., Finkemeier I. . ‘Lysine acetylome profiling uncovers novel histone deacetylase substrate proteins in Arabidopsis.’ Molecular Systems Biology 13, Nr. 10. doi: 10.15252/msb.20177819.
  • Finkemeier I. . ‘Identification of the missing mitochondrial methyltransferase of citrate synthase.’ FEBS Letters 591, Nr. 12: 1653–1656. doi: 10.1002/1873-3468.12692.
  • Lassowskat I., Hartl M., Hosp F., Boersema P., Mann M., Finkemeier I. . ‘Dimethyl-labeling-based quantification of the lysine acetylome and proteome of plants.’ In Photorespiration, Methods in Molecular Biology , edited by Fernie A., Bauwe H., Weber A., 65–81. Totowa, NJ: Humana Press. doi: 10.1007/978-1-4939-7225-8_5.
  • Née G., Kramer K., Nakabayashi K., Yuan B., Xiang Y., Miatton E., Finkemeier I., Soppe W. . ‘DELAY of GERMINATION1 requires PP2C phosphatases of the ABA signalling pathway to control seed dormancy /631/449/2679/2683 /631/449/2653 article.’ Nature Communications 8, Nr. 1. doi: 10.1038/s41467-017-00113-6.
  • Ruhe J., Agler M., Placzek A., Kramer K., Finkemeier I., Kemen E. . ‘Obligate biotroph pathogens of the genus albugo are better adapted to active host defense compared to niche competitors.’ Frontiers in Plant Science 7, Nr. null. doi: 10.3389/fpls.2016.00820.
  • Xiang Y., Song B., Née G., Kramer K., Finkemeier I., Soppe W. . ‘Sequence polymorphisms at the REDUCED DORMANCY5 pseudophosphatase underlie natural variation in Arabidopsis dormancy.’ Plant Physiology 171, Nr. 4: 2659–2670. doi: 10.1104/pp.16.00525.
  • Sindlinger J., Bierlmeier J., Geiger L., Kramer K., Finkemeier I., Schwarzer D. . ‘Probing the structure-activity relationship of endogenous histone deacetylase complexes with immobilized peptide-inhibitors.’ Journal of Peptide Science 22, Nr. 5: 352–359. doi: 10.1002/psc.2875.
  • Rösler S., Kramer K., Finkemeier I., Humpf H., Tudzynski B. . ‘The SAGA complex in the rice pathogen Fusarium fujikuroi: structure and functional characterization.’ Molecular Microbiology 102, Nr. 6: 951–974. doi: 10.1111/mmi.13528.
  • Dose A., Sindlinger J., Bierlmeier J., Bakirbas A., Schulze-Osthoff K., Einsele-Scholz S., Hartl M., Essmann F., Finkemeier I., Schwarzer D. . ‘Interrogating substrate selectivity and composition of endogenous histone deacetylase complexes with chemical probes.’ Angewandte Chemie International Edition 55, Nr. 3: 1192–1195. doi: 10.1002/anie.201508174.
  • Hartl M., König A., Finkemeier I. . ‘Identification of lysine-acetylated mitochondrial proteins and their acetylation sites.’ In Plant Mitochondria, edited by James Whelan, Monika W. Murcha, 107–121. Totowa, NJ: Humana Press. doi: 10.1007/978-1-4939-2639-8_7.
  • Hartl M., König A., Finkemeier I. . ‘Identification of lysine-acetylated mitochondrial proteins and their acetylation sites.’ In Plant Mitochondria: Methods and Protocols, edited by Humana MiMB, 107–121. Heidelberg: Springer. doi: 10.1007/978-1-4939-2639-8_7.
  • Wagner S., Behera S., De Bortoli S., Logan D., Fuchs P., Carraretto L., Teardo E., Cendron L., Nietzel T., Füßl M., Doccula F., Navazio L., Fricker M., Van Aken O., Finkemeier I., Meyer A., Szabò I., Costa A., Schwarzländer M. . ‘The EF-hand Ca2+ binding protein MICU choreographs mitochondrial Ca2+ dynamics in arabidopsis.’ The Plant cell 27, Nr. 11: 3190–3212. doi: 10.1105/tpc.15.00509.
  • König A., Hartl M., Boersema P., Mann M., Finkemeier I. . ‘The mitochondrial lysine acetylome of Arabidopsis.’ Mitochondrion 19, Nr. null: 252–260. doi: 10.1016/j.mito.2014.03.004.
  • Braun H., Binder S., Brennicke A., Eubel H., Fernie A., Finkemeier I., Klodmann J., König A., Kühn K., Meyer E., Obata T., Schwarzländer M., Takenaka M., Zehrmann A. . ‘The life of plant mitochondrial complex I.’ Mitochondrion 19, Nr. null: 295–313. doi: 10.1016/j.mito.2014.02.006.
  • König A., Hartl M., Pham P., Laxa M., Boersema P., Orwat A., Kalitventseva I., Plöchinger M., Braun H., Leister D., Mann M., Wachter A., Fernie A., Finkemeier I. . ‘The Arabidopsis class II sirtuin is a lysine deacetylase and interacts with mitochondrial energy metabolism.’ Plant Physiology 164, Nr. 3: 1401–1414. doi: 10.1104/pp.113.232496.
  • Schmidtmann E., König A., Orwat A., Leister D., Hartl M., Finkemeier I. . ‘Redox regulation of Arabidopsis mitochondrial citrate synthase.’ Molecular Plant 7, Nr. 1: 156–169.
  • Gläßer C., Haberer G., Finkemeier I., Pfannschmidt T., Kleine T., Leister D., Dietz K., Häusler R., Grimm B., Mayer K. . ‘Meta-analysis of retrograde signaling in Arabidopsis thaliana reveals a core module of genes embedded in complex cellular signaling networks.’ Molecular Plant 7, Nr. 7: 1167–1190. doi: 10.1093/mp/ssu042.
  • Schlicke H., Hartwig A., Firtzlaff V., Richter A., Glässer C., Maier K., Finkemeier I., Grimm B. . ‘Induced deactivation of genes encoding chlorophyll biosynthesis enzymes disentangles tetrapyrrole-mediated retrograde signaling.’ Molecular Plant 7, Nr. 7: 1211–1227. doi: 10.1093/mp/ssu034.
  • El Zawily A., Schwarzländer M., Finkemeier I., Johnston I., Benamar A., Cao Y., Gissot C., Meyer A., Wilson K., Datla R., Macherel D., Jones N., Logan D. . ‘FRIENDLY regulates mitochondrial distribution, fusion, and quality control in Arabidopsis.’ Plant Physiology 166, Nr. 2: 808–828. doi: 10.1104/pp.114.243824.
  • Finkemeier I., König A., Heard W., Nunes-Nesi A., Pham P., Leister D., Fernie A., Sweetlove L. . ‘Transcriptomic analysis of the role of carboxylic acids in metabolite signaling in arabidopsis leaves.’ Plant Physiology 162, Nr. 1: 239–253. doi: 10.1104/pp.113.214114.
  • Finkemeier I., Schwarzer D. . „Protein modification. Lysine acetylation: A well-known protein modification in new light.“ BIOspektrum 19, Nr. 7: 810–812. doi: 10.1007/s12268-013-0392-z.
  • Schwarzländer M., Finkemeier I. . ‘Mitochondrial energy and redox signaling in plants.’ Antioxidants and Redox Signaling 18, Nr. 16: 2122–2144. doi: 10.1089/ars.2012.5104.
  • Schwarzländer M., König A., Sweetlove L., Finkemeier I. . ‘The impact of impaired mitochondrial function on retrograde signalling: A meta-analysis of transcriptomic responses.’ Journal of Experimental Botany 63, Nr. 4: 1735–1750. doi: 10.1093/jxb/err374.
  • Hartl M., Finkemeier I. . ‘Plant mitochondrial retrograde signaling: Post-translational modifications enter the stage.’ Frontiers in Plant Science 3, Nr. null. doi: 10.3389/fpls.2012.00253.
  • Finkemeier I., Laxa M., Miguet L., Howden A., Sweetlove L. . ‘Proteins of diverse function and subcellular location are lysine acetylated in Arabidopsis.’ Plant Physiology 155, Nr. 4: 1779–1790. doi: 10.1104/pp.110.171595.
  • Finkemeier I, Dario L. . ‘Plant Chloroplasts and Other Plastids .’ eLS na.
  • Finkemeier I, Sweetlove LJ. . ‘The role of malate in plant homeostasis.’ F1000 Biology Reports I, Nr. 47.
  • Morgan M., Lehmann M., Schwarzländer M., Baxter C., Sienkiewicz-Porzucek A., Williams T., Schauer N., Fernie A., Fricker M., Ratcliffe R., Sweetlove L., Finkemeier I. . ‘Decrease in manganese superoxide dismutase leads to reduced root growth and affects tricarboxylic acid cycle flux and mitochondrial redox homeostasis.’ Plant Physiology 147, Nr. 1: 101–114. doi: 10.1104/pp.107.113613.
  • Gama F., Keech O., Eymery F., Finkemeier I., Gelhaye E., Gardeström P., Dietz K., Rey P., Jacquot J., Rouhier N. . ‘The mitochondrial type II peroxiredoxin from poplar.’ Physiologia Plantarum 129, Nr. 1: 196–206. doi: 10.1111/j.1399-3054.2006.00785.x.
  • Romero-Puertas M., Laxa M., Mattè A., Zaninotto F., Finkemeier I., Jones A., Perazzolli M., Vandelle E., Dietz K., Delledonne M. . ‘S-nitrosylation of peroxiredoxin II E promotes peroxynitrite-mediated tyrosine nitration.’ The Plant cell 19, Nr. 12: 4120–4130. doi: 10.1105/tpc.107.055061.
  • Barranco-Medina S., Krell T., Finkemeier I., Sevilla F., Lázaro J., Dietz K. . ‘Biochemical and molecular characterization of the mitochondrial peroxiredoxin PsPrxII F from Pisum sativum.’ Plant Physiology and Biochemistry 45, Nr. null: 729–739. doi: 10.1016/j.plaphy.2007.07.017.
  • Dietz K.-J, Stork T, Finkemeier I, Lamkemeyer P, Li W.X, El-Tayeb MA, Michel KP, Pistorius E, Baier M. . ‘The Role of Peroxiredoxins in Oxygenic Photosynthesis of Cyanobacteria and Higher Plants: Peroxide Detoxification or Redox Sensing? .’ In Photoprotection, photoinhibition, gene regulation, and environment, edited by Demmig-Adams B, Adams W, Mattoo A, 303–319. Dordrecht: Kluwer Academic.
  • Dietz K., Jacob S., Oelze M., Laxa M., Tognetti V., De Miranda S., Baier M., Finkemeier I. . ‘The function of peroxiredoxins in plant organelle redox metabolism.’ Journal of Experimental Botany 57, Nr. 8: 1697–1709. doi: 10.1093/jxb/erj160.
  • Finkemeier I., Sweetlove L. . ‘Signalling in primary metabolism.’ New Phytologist 171, Nr. 3: 445–447. doi: 10.1111/j.1469-8137.2006.01805.x.
  • Groten K., Dutilleul C., Van Heerden P., Vanacker H., Bernard S., Finkemeier I., Dietz K., Foyer C. . ‘Redox regulation of peroxiredoxin and proteinases by ascorbate and thiols during pea root nodule senescence.’ FEBS Letters 580, Nr. 5: 1269–1276. doi: 10.1016/j.febslet.2006.01.043.
  • Lamkemeyer P., Laxa M., Collin V., Li W., Finkemeier I., Schöttler M., Holtkamp V., Tognetti V., Issakidis-Bourguet E., Kandlbinder A., Weis E., Miginiac-Maslow M., Dietz K. . ‘Peroxiredoxin Q of Arabidopsis thaliana is attached to the thylakoids and functions in context of photosynthesis.’ The Plant journal 45, Nr. 6: 968–981. doi: 10.1111/j.1365-313X.2006.02665.x.
  • Finkemeier I., Goodman M., Lamkemeyer P., Kandlbinder A., Sweetlove L., Dietz K. . ‘The mitochondrial type II peroxiredoxin F is essential for redox homeostasis and root growth of Arabidopsis thaliana under stress.’ Journal of Biological Chemistry 280, Nr. 13: 12168–12180. doi: 10.1074/jbc.M413189200.
  • Rouhier N., Villarejo A., Srivastava M., Gelhaye E., Keech O., Droux M., Finkemeier I., Samuelsson G., Dietz K., Jacquot J., Wingsle G. . ‘Identification of plant glutaredoxin targets.’ Antioxidants and Redox Signaling 7, Nr. null: 919–929. doi: 10.1089/ars.2005.7.919.
  • Kandlbinder A., Finkemeier I., Wormuth D., Hanitzsch M., Dietz K. . ‘The antioxidant status of photosynthesizing leaves under nutrient deficiency: Redox regulation, gene expression and antioxidant activity in Arabidopsis thaliana.’ Physiologia Plantarum 120, Nr. 1: 63–73. doi: 10.1111/j.0031-9317.2004.0272.x.
  • Sharma S., Kaul S., Metwally A., Goyal K., Finkemeier I., Dietz K. . ‘Cadmium toxicity to barley (Hordeum vulgare) as affected by varying Fe nutritional status.’ Plant Science 166, Nr. 5: 1287–1295. doi: 10.1016/j.plantsci.2004.01.006.
  • Metwally A., Finkemeier I., Georgi M., Dietz K. . ‘Salicylic acid alleviates the cadmium toxicity in barley seedlings.’ Plant Physiology 132, Nr. 1: 272–281. doi: 10.1104/pp.102.018457.
  • Horling F., Lamkemeyer P., König J., Finkemeier I., Kandlbinder A., Baier M., Dietz K. . ‘Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis.’ Plant Physiology 131, Nr. 1: 317–325. doi: 10.1104/pp.010017.
  • Finkemeier I., Kluge C., Metwally A., Georgi M., Grotjohann N., Dietz K. . ‘Alterations in Cd-induced gene expression under nitrogen deficiency in Hordeum vulgare.’ Plant, Cell and Environment 26, Nr. 6: 821–833. doi: 10.1046/j.1365-3040.2003.01014.x.