Publications
2021 2020 Charoenwattanasatien R, Zinzius K, Scholz M, Wicke S, Tanaka H, Brandenburg JS, Ikegami T, Matsumoto T, Oda T, Sato M, Hippler M, Kurisu G . 2020 . ‘Calcium sensing via EF-hand 4 enables thioredoxin activity in the sensor-responder protein calredoxin in the green alga Chlamydomonas reinhardtii .’ Journal of Biological Chemistry 295, № 1: 170–180. doi : 10.1074/jbc.RA119.008735 .Chen X, Fang D, Wu C, Liu B, Liu Y, Sahu SK, Song B, Yang S, Yang T, Wei J, Wang X, Zhang W, Xu Q, Wang H, Yuan L, Liao X, Chen L, Chen Z, Fu Y, Chang Y, Lu L, Yang H, Wang J, Xu X, Liu X, Wicke S, Liu H . 2020 . ‘Comparative plastome analysis of root- and stem-feeding parasites of Santalales untangle the footprints of feeding mode and lifestyle transitions .’ Genome Biology and Evolution 12, № 1: 3663–3676. doi : 10.1093/gbe/evz271 .Li F-W, Nishiyama T, Waller M, Frangedakis, E, Keller J, Li Z, Fernandez-Pozo N, Barker MS, Bennett T, Blázquez MA, Cheng S, Cuming AC, de Vries J, de Vries S, Delaux P-M, Diop IS, Harrison CJ, Hauser D, Hernández-García J, Kirbis A, Meeks JC, Monte I, Mutte SK, Neubauer A, Quandt D, Robison T, Shimamura M, Rensing SA, Villarreal JC, Weijers D, Wicke S, Wong GK-S, Sakakibara K, Szövényi P . 2020 . ‘Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts .’ Nature Plants 6: 259–272. doi : 10.1038/s41477-020-0618-2 .2019 Qu XJ, Fan SJ, Wicke S, Yi TS . 2019 . ‘Plastome reduction in the only parasitic gymnosperm Parasitaxus is due to losses of photosynthesis but not housekeeping genes and apparently involves the secondary gain of a large inverted repeat .’ Genome Biology and Evolution 11, № 10: 2789–2796. doi : 10.1093/gbe/evz187 .Aly R, Lati R, Abu-Nassar J, Ziadna H, Achdari G, von Muenchow CS, Wicke S, Bari VK, Eizenberg H . 2019 . ‘The weedy parasite Phelipanche aegyptiaca attacks Brassica rapa var. rapa L. for the first time in Israel .’ Plant Disease 2019: 1. doi : 10.1094/PDIS-02-19-0285-PDN .2018 Maul K, Krug M, Nickrent DL, Müller KF, Quandt D, Wicke S . 2018 . ‘Morphology, geographic distribution, and host preferences are poor predictors of phylogenetic relatedness in the mistletoe genus Viscum L. ’ Molecular Phylogenetics and Evolution 131: 106–115. doi : 10.1016/j.ympev.2018.10.041 .Wicke S, Naumann J . 2018 . ‘Molecular evolution of plastid genomes in parasitic flowering plants .’ In Advances in Botanical Research , edited by Chaw S-M, Jansen RK , 315–347. 1st Ed. Boston, New York, San Diego: Academic Press. doi : 10.1016/bs.abr.2017.11.014 .Barrett CF, Wicke S, Sass C . 2018 . ‘Dense infraspecific sampling reveals rapid and independent trajectories of plastome degradation in a heterotrophic orchid complex .’ New Phytologist 218, № 3: 1192–1204. doi : 10.1111/nph.15072 .Wang Y-H, Wicke S, Wang H, Jin J-J, Chen S-Y, Zhang S-D, Li D-Z, Yi T-S . 2018 . ‘Plastid genome evolution in the early-diverging legume subfamily Cercidoideae (Fabaceae) .’ Frontiers in Plant Science 8: 138. doi : 10.3389/fpls.2018.00138 .2017 Noben S, Kessler M, Quandt D, Weigand A, Wicke S, Krug M, Lehnert M . 2017 . ‘Biogeography of the Gondwanan tree fern family Dicksoniaceae—A tale of vicariance, dispersal and extinction .’ Journal of Biogeography 44, № 11: 2648–2659. doi : 10.1111/jbi.13056 .Levy Karin E, Ashkenazy H, Wicke S, Pupko T, Mayrose I . 2017 . ‘TraitRateProp: A web server for the detection of trait-dependent evolutionary rate shifts in sequence sites .’ Nucleic Acids Research 45, № 1: W260–W264. doi : 10.1093/nar/gkx288 .Levy Karin E, Wicke S, Pupko T, Mayrose I . 2017 . ‘An integrated model of phenotypic trait changes and site-specific sequence evolution .’ Systematic Biology 66, № 6: 917–933. doi : 10.1093/sysbio/syx032 .Röschenbleck J, Wicke S, Weinl S, Kudla J, Müller KF . 2017 . ‘Genus-wide screening reveals four distinct types of structural plastid genome organization in Pelargonium (Geraniaceae) .’ Genome Biology and Evolution 9, № 1: 64–76. doi : 10.1093/gbe/evw271 .2016 Wicke S, Müller KF, dePamphilis CW, Quandt D, Bellot S, Schneeweiss GM . 2016 . ‘Mechanistic model of evolutionary rate variation en route to a nonphotosynthetic lifestyle in plants .’ Proceedings of the National Academy of Sciences of the United States of America 113, № 32: 9045–9050. doi : 10.1073/pnas.1607576113 .Feng YL, Wicke S, Li JW, Han Y, Lin CS, Li DZ, Zhou TT, Huang WC, Huang LQ, Jin XH . 2016 . ‘Lineage-specific reductions of plastid genomes in an orchid tribe with partially and fully mycoheterotrophic species .’ Genome Biology and Evolution 8, № 7: 2164–2175. doi : 10.1093/gbe/evw144 .Cusimano N, Wicke S . 2016 . ‘Massive intracellular gene transfer during plastid genome reduction in nongreen Orobanchaceae .’ New Phytologist 210, № 2: 680–693. doi : 10.1111/nph.13784 .2015 2014 2013 Wicke S, Müller KF, dePamphilis CW, Quandt D, Wickett NJ, Zhang Y, Renner SS, Schneeweiss GM . 2013 . ‘Mechanisms of functional and physical genome reduction in photosynthetic and nonphotosynthetic parasitic plants of the broomrape family .’ The Plant Cell 25: 3711–3725. doi : 10.1105/tpc.113.113373 .Wicke S . 2013 . ‘Genomic evolution in Orobanchaceae .’ In Parasitic Orobanchaceae - Parasitic Mechanisms and Control Strategies
, edited by Joel DM, Gressel J, Musselman LJ , 267–286. Düsseldorf: Springer VDI Verlag. doi : 10.1007/978-3-642-38146-1_15 .2012 2011 Wicke S, Costa A, Muñoz J, Quandt D . 2011 . ‘Restless 5S: The re-arrangement(s) and evolution of the nuclear ribosomal DNA
in land plants .’ Molecular Phylogenetics and Evolution 61, № 2: 321–332. doi : 10.1016/j.ympev.2011.06.023 .Wicke S, Schneeweiss GM, dePamphilis CW, Müller KF, Quandt D . 2011 . ‘The evolution of the plastid chromosome in land plants: gene content, gene order, gene function .’ Plant Molecular Biology 76, № 3-5: 273–297. doi : 10.1007/s11103-011-9762-4 .2010 2009 
