Publications
2023 2022 Krause L. , Chakraborty A. , Andreou , A. and Klostermeier , D. , 2022 . Linking translation factor conformational dynamics with translation efficiencies and gene expression . Biophysical Journal . 121 (3 ), pp. 338a –339a . ISSN 0006-3495.Klostermeier and D. , 2022 . Analysis of the conformational space and dynamics of RNA helicases by single-molecule FRET in solution and on surfaces . Methods in Enzymology . 673 , pp. 251 –310 . ISSN 0076-6879. doi : 10.1016/bs.mie.2022.03.043 .Krause , L. , Willing , F. , Andreou , A. and Klostermeier , D. , 2022 . The domains of yeast eIF4G, eIF4E and the cap fine-tune eIF4A activities through an intricate network of stimulatory and inhibitory effects . Nucleic Acids Research . 50 (11 ), pp. 6497 –6510 . ISSN 0305-1048. doi : 10.1093/nar/gkac437 .Chakraborty , A. , Krause , L. and Klostermeier , D. , 2022 . Determination of rate constants for conformational changes of RNA helicases by single-molecule FRET TIRF microscopy . Methods . 204 , pp. 428 –441 . ISSN 1046-2023. doi : 10.1016/j.ymeth.2022.03.004 .2021 Hirsch , J. and Klostermeier , D. , 2021 . What makes a type IIA topoisomerase a gyrase or a Topo IV? . Nucleic Acids Res . . 2021 . doi : 10.1093/nar/gkab270 .D. , Klostermeier , 2021 . Towards Conformation-Sensitive Inhibition of Gyrase: Implications of Mechanistic Insight for the Identification and Improvement of Inhibitors . Molecules . . 26 (5 ) . doi : 10.3390/molecules26051234. .Donsbach , P. and Klostermeier , D. , 2021 . Regulation of RNA helicase activity: principles and examples . Biol Chem . . 2021 . doi : 10.1515/hsz-2020-0362 .Krause , L. and Klostermeier , D. , 2021 . Probing RNA Helicase Conformational Changes by Single-Molecule FRET Microscopy . Methods Mol Biol . 2209 , pp. 119 –132 . doi : 10.1007/978-1-0716-0935-4_8 .Klostermeier and D. , 2021 . Highlight: RNA helicases–structure, function, mechanism and regulation . Biological Chemistry Hoppe-Seyler . 402 (5 ), pp. 527 –528 . ISSN 0177-3593. doi : 10.1515/hsz-2021-0194 .Romanovska , A. , Keil , J. , Tophoven , J. , Furkan Oruc , M. , Schmidt , M. , Breisch , M. , Sengstock* , C. and Weidlich , D.Klostermeier* D. Tiller* J. , 2021 . Conjugates of ciprofloxacin and amphiphilic block copoly (2-alkyl-2-oxazolines) s overcome efflux pumps and are active against CIP-resistant bacteria . Molecular pharmaceutics . 18 (9 ), pp. 3532 –3543 . ISSN 1543-8384. doi : 10.1021/acs.molpharmaceut.1c00430 .2020 Donsbach , P. , Yee , BA. , Sanchez-Hevia , D. , Berenguer , J. , Aigner , S. , Yeo , GW. and Klostermeier , D. , 2020 . The Thermus thermophilus DEAD-box protein Hera is a general RNA binding protein and plays a key role in tRNA metabolism . RNA . . 11 , pp. 1557 –1574 . doi : 10.1261/rna.075580.120 .Collin , F. , Weisslocker-Schaetzel , M. and Klostermeier , D. , 2020 . A β-hairpin is a Minimal Latch that Supports Positive Supercoiling by Reverse Gyrase . J Mol Biol . 432 (16 ), pp. 4762 –4771 . doi : 10.1016/j.jmb.2020.06.018 .Leemans , M. , Galicia , C. , Deyaert , E. , Daems , E. , Krause , L. , Paesmans , J. , Pardon , E. , Steyaert , J. , Kortholt , A. , Sobott , F. , Klostermeier , D. and Versées , W. , 2020 . Allosteric modulation of the GTPase activity of a bacterial LRRK2 homolog by conformation-specific Nanobodies . Biochem J . . 477 (7 ), pp. 1203 –1218 . doi : 10.1042/BCJ20190843 .Weidlich , D. and Klostermeier , D. , 2020 . Functional interactions between gyrase subunits are optimized in a species-specific manner . J Biol Chem . . 295 (8 ), pp. 2299 –2312 . doi : 10.1074/jbc.RA119.010245 .2019 2018 Stelljes , J. , Weidlich , D. , Gubaev , A. and Klostermeier , D. , 2018 . Gyrase containing a single C-terminal domain catalyzes negative supercoiling of DNA by decreasing the linking number in steps of two . Nucleic Acids Research . 46 (13 ), pp. 6773 –6784 . ISSN 0305-1048. doi : 10.1093/nar/gky470 .Klostermeier , Dagmar , 2018 . Why Two? On the Role of (A-)Symmetry in Negative Supercoiling of DNA by Gyrase . Int. J. Mol. Sci. . 19 . doi : 10.3390/ijms19051489 .2017 Hartmann , S. , Gubaev , A. and Klostermeier , D. , 2017 . Binding and hydrolysis of a single ATP is sufficient for negative supercoiling of DNA by gyrase . J. Mol. Biol. . 429 (23 ), pp. 3717 –3729 . doi : 10.1016/j.jmb.2017.10.005 .Samantanga , B. , Andreou , A.Z. and Klostermeier , D. , 2017 . Allosteric regulation of helicase core activities of the DEAD-box helicase YxiN by RNA binding to its RNA recognitation motif . Nuc. Acids Res. . 45 (4 ), pp. 1994 –2006 . doi : 10.1093/nar/gkx014 .Klostermeier , D. , Rudolph and M.G. , 2017 . Biophysical Chemistry . N/A : unbekannt / n.a. / unknown ISBN 9781482252231.Andreou , A. , Harms , U. and Klostermeier , D. , 2017 . eIF4B stimulates eIF4A ATPase and unwinding activities by direct interaction through its 7-repeats region . RNA Biol. . 14 (1 ), pp. 113 –123 . doi : 10.1080/15476286.2016.1259782 .2016 Hartmann , S. , Weidlich , D. and Klostermeier , D. , 2016 . Single-Molecule Confocal FRET Microscopy to Dissect Conformational Changes in the Catalytic Cycle of DNA Topoisomerases . Methods Enzymol . 581 , pp. 317 –351 . doi : 10.1016/bs.mie.2016.08.013 .Gubaev , A. , Weidlich , D. and Klostermeier , D. , 2016 . DNA gyrase with a single catalytic tyrosine can catalyze DNA supercoiling by a nicking-closing mechanism . Nucl. Acids Res. . 44 (21 ), pp. 10354 –10366 . doi : 10.1093/nar/gkw740 .Heininger , A.U. , Hackert , P. , Andreou , A.Z. , Boon , K.L. , Memet , I. , Prior , M. , Clancy , A. , Schmidt , B. , Urlaub , H. , Schleiff , E. , Sloan , K.E. , Deckers , M. , Lührmann , R. , Enderlein , J. , Klostermeier , D. , Rehling , P. and Bohnsack , M.T. , 2016 . Protein cofactor competition regulates the action of a multifunctional RNA helicase in different pathways . RNA Biol . 13 (3 ), pp. 320 –330 . doi : 10.1080/15476286.2016.1142038 .2015 Nianios , D. , Thierbach , S. , Steimer , L. , Lulchev , P. , Klostermeier , D. and Fetzner , S. , 2015 . Nickel quercetinase, a "promiscuous metalloenzyme: metal incorporation and metal ligand substitution studies . BMC Biochem . 16 (10 ) . doi : 10.1186/s12858-015-0039-4 .Rudolph , M.G. and Klostermeier , D. , 2015 . When core competence is not enough: functional interplay of the DEAD-box helicase core with ancillary domains and auxilliary factors in RNA binding and unwinding . Biol. Chem. . 396 (8 ), pp. 849 –865 . doi : 10.1515/hsz-2014-0277 .2014 Samatanga , B. and Klostermeier , D. , 2014 . DEAD-box RNA helicase domains exhibit a continuum between complete functional independence and high thermodynamic coupling in nucleotide and RNA duplex recognition . Nucl. Acids Res . 42 (16 ), pp. 10644 –10654 .Del Toro Duany , Y. , Ganguly , A. and Klostermeier , D. , 2014 . Differential contributions of the latch in Thermotoga maritima reverse gyrase to binding of single-stranded DNA before and after ATP hydrolysis . Biol. Chem. . 395 (1 ), pp. 83 –93 . doi : 10.1515/hsz-2013-0177 .Andreou , A.Z. and Klostermeier , D. , 2014 . eIF4B and eIF4G jointly stimulate eIF4A ATPase and unwinding activities by modulation of the eIF4A conformational cycle . J. Mol. Biol. . 426 (1 ), pp. 51 –61 . doi : 10.1016/j.jmb.2013.09.027 .Lanz , M.A. , Farhat , M. and Klostermeier , D. , 2014 . The acidic C-terminal tail of the GyrA subunit moderates the DNA supercoiling activity of Bacillus subtilis gyrase . J. Biol. Chem. . 289 (18 ), pp. 12275 –12285 . doi : 10.1074/jbc.M114.547745 .Gubaev , A. and Klostermeier , D. , 2014 . The mechanism of negative DNA supercoiling: a cascade of DNA-induced conformational changes prepares gyrase for strand passage . DNA Repair . 16 , pp. 23 –24 . ISSN 1568-7864. doi : 10.1016/j.dnarep.2014.01.011 .Harms , U. , Andreou , A.Z. , Gubaev , A. and Klostermeier , D. , 2014 . eIF4B, eIF4G and RNA regulate eIF4A activity in translation initiation by modulating the eIF4A conformational cycle . Nucl. Acids Res. . 42 (12 ), pp. 7911 –7922 . doi : 10.1093/nar/gku440 .Lulchev , P. and Klostermeier , D. , 2014 . Reverse gyrase-recent advances and current mechanistic understanding of positive DNA supercoiling . Nucl. Acids Res. . 42 , pp. 8200 –8213 . doi : 10.1093/nar/gku589 .Andreou , A.Z. and Klostermeier , D. , 2014 . Fluorescence Methods in the Investigation of the DEAD-Box Helicase Mechanism . Experienta Supplementum . 105 , pp. 161 –192 . doi : 10.1007/978-3-0348-0856-9_8 .2013 Klostermeier and D. , 2013 . Rearranging RNA structures at 75°C? Towards the physiologic function of the DEAD-box helicase Hera from Thermus thermophilus”, for the Biopolymers Special Issue “Nucleic acids . Biopolymers . 99 (12 ), pp. 1137 –1146 . doi : 10.1002/bip.22316 .Gubaev , A. and Klostermeier , D. , 2013 . Single molecule FRET reveals DNA- and nucleotide-induced conformational changes in DNA gyrase preceding the strand passage reaction, for the DNA repair Special Issue “Single molecule approaches: watching DNA repair one molecule at a time . DNA repair . . doi : 10.1042/BST0390611 .Del Toro Duany , Y. , Ganguly , A. and Klostermeier , D. , 2013 . Differential contributions of the latch in Thermotoga maritima reverse gyrase to binding of single-stranded DNA before and after ATP hydrolysis . Biol. Chem. . 394 . doi : 10.1515/hsz-2013-0177 .Andreou , A. Z. and Klostermeier , D. , 2013 . eIF4B and eIF4G jointly stimulate eIF4A ATPase and unwinding activities by modulation of the eIF4A conformational cycle . J. Mol. Biol. . 2013 . doi : 10.1016/j.jmb.2013.09.027. .Steimer , L. , Wurm , J.P. , Linden , M.H. , Rudolph , M.G. , Wöhnert , J. and Klostermeier , D. , 2013 . Recognition of two distinct elements in the RNA substrate by the RNA-binding domain of the T. thermophilus DEAD box helicase Hera . Nucl. Acids Res. . 41 (12 ), pp. 6259 –6272 . doi : 10.1093/nar/gkt323 .Rudolph , M.G. and Klostermeier , D. , 2013 . Mapping the Spectrum of Conformational States of the DNA- and C-Gates in Bacillus subtilis Gyrase . J. Mol. Biol. . 2013 .Klostermeier and D. , 2013 . Lifelong companions: RNA helicases and their roles in RNA metabolism . RNA Biol. . 10 (1 ), pp. 2 –3 .Rudolph , M.G. , del Toro Duany , Y. , Jungblut , S.P. , Ganguly , A. and Klostermeier , D. , 2013 . Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling . Nucl. Acids Res. . 41 (2 ), pp. 1058 –1070 . doi : 10.1093/nar/gks1073 .Ganguly , A. , del Toro Duany , Y. and Klostermeier , D. , 2013 . Reverse gyrase transiently unwinds double-stranded DNA in an ATP-dependent reaction . J. Mol. Biol. . 425 (1 ), pp. 32 –40 .2012 Andreou , A.Z. and Klostermeier , D. , 2012 . DEAD-box helicase conformational changes monitored by single molecule fluorescence resonance energy transfer”, in “RNA Helicases: Analysis of Molecular Mechanisms and Biological Functions . Methods in Enzymology . 511 , pp. 75 –109 .Steimer , L. and Klostermeier , D. , 2012 . RNA helicases in infection and disease”, Special Issue on “RNA and Disease . RNA Biology . 9 (6 ), pp. 751 –771 .Andreou , A.Z. and Klostermeier , D. , 2012 . The DEAD box helicase eIF4A: paradigm or special case?” for the RNA Biology Special Issue on “RNA helicases . RNA Biology . 10 (1 ), pp. 19 –32 .Andreou , A. and Klostermeier , D. , 2012 . Conformational changes of DEAD-box helicases monitored by single molecule fluorescence resonance energy transfer . Methods Enzymol. . 511 , pp. 75 –109 .Lanz , M. and Klostermeier , D. , 2012 . The GyrA-box determines the geometry of DNA bound to gyrase and couples DNA binding to the nucleotide cycle . Nucleic Acids Res. . 40 (21 ), pp. 10893 –10903 .Andreou , A. and Klostermeier , D. , 2012 . The DEAD-box helicase elF4A: Paradigm or the odd one out? . RNA Biol. . 10 (1 ), pp. 1 –14 .Ganguly , A. , Del Toro Duany , Y. and Klostermeier , D. , 2012 . Reverse Gyrase Transiently Unwinds Double-Stranded DNA in an ATP-Dependent Reaction . J. Mol. Biol. . 425 (1 ), pp. 32 –40 .Rudolph , MG. , Del Toro Duany , Y. , Jungblut , SP. , Ganguly , A. and Klostermeier , D. , 2012 . Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling . Nucleic Acids Res. . 2012 , pp. 1 –13 .Gubaev , A. and Klostermeier , D. , 2012 . Potassium ions are required for nucleotide-induced closure of gyrase N-gate . J. Biol. Chem . 287 (14 ), pp. 10916 –10921 .2011 Klostermeier , D. , 2011 . Highlight: Mechanisms of RNA-mediated regulation . Biological Chemistry . 392 (4 ), p. 275 . ISSN 1431-6730. doi : 10.1515/BC.2011.047 .Hammann , C. , Hartmann , RK. , Helm , M. , Klostermeier , D. , Marchfelder , A. , Suess , B. and Vörtler , S. , 2011 . Regulatory RNAs and beyond . EMBO Reports . 12 (8 ), pp. 751 –753 . ISSN 1469-221X. doi : 10.1038/embor.2011.150 .Ganguly , A. , del , Toro Duany Y , Rudolph , MG. and Klostermeier , D. , 2011 . The latch modulates nucleotide and DNA binding to the helicase-like domain of Thermotoga maritima reverse gyrase and is required for positive DNA supercoiling . Nucleic Acids Research . 39 (5 ), pp. 1789 –1800 . ISSN 0305-1048. doi : 10.1093/nar/gkq1048 .Strohmeier , J. , Hertel , I. , Diederichsen , U. , Rudolph , M.G. and Klostermeier , D. , 2011 . Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop . Biological Chemistry . 329 (4 ), pp. 357 –369 . ISSN 1431-6730. doi : 10.1515/BC.2011.034 .Klostermeier , D. , 2011 . Single-molecule FRET reveals nucleotide-driven conformational changes in molecular machines and their link to RNA unwinding and DNA supercoiling . Biochemical Society Transactions . 39 (2 ), pp. 611 –616 . ISSN 0300-5127. doi : 10.1042/BST0390611 .del , Toro Duany Y and Klostermeier , D. , 2011 . Nucleotide-driven conformational changes in the reverse gyrase helicase-like domain couple the nucleotide cycle to DNA processing . Physical Chemistry Chemical Physics ., p. Paper . ISSN 1463-9076. doi : 10.1039/C0CP02859B .Gubaev , Ayrat and Klostermeier , Dagmar , 2011 . DNA-induced narrowing of the gyrase N-gate coordinates T-segment capture and strand passage. Proceedings of the National Academy of Sciences of the United States of America 108 (34 ), pp. 14085 –14090 . ISSN 0027-8424. doi : 10.1073/pnas.1102100108 .Lanz , Martin A. and Klostermeier , Dagmar , 2011 . Guiding strand passage: DNA-induced movement of the gyrase C-terminal domains defines an early step in the supercoiling cycle. . Nucleic Acids Research ., pp. 1 –14 . ISSN 0305-1048. doi : 10.1093/nar/gkr680 .Del Toro Duany , Y. , Klostermeier , D. and Rudolph , M.G. , 2011 . The conformational flexibility of the helicase-like domain from Thermotoga maritima reverse gyrase is restricted by the topoisomerase domain . Biochemistry . 50 (26 ), pp. 5816 –5823 . ISSN 0006-2960.Hilbert , M. , Kebbel , F. , Gubaev , A. and Klostermeier , D. , 2011 . eIF4G stimulates the activity of the DEAD box protein eIF4A by a conformational guidance mechanism . Nucl. Acids Res. . 2011 (39(6) ), pp. 2260 –2270 .2010 2009 Rudolph , M.G. and Klostermeier , D. , 2009 . The Thermus thermophilus DEAD box helicase Hera contains a modified RNA recognition motif domain loosely connected to the helicase core . RNA . 15 (11 ), pp. 1993 –2001 . ISSN 1355-8382. doi : 10.1261/rna.1820009 .Karow , A.R. and Klostermeier , D. , 2009 . A conformational change in the helicase core is necessary but not sufficient for RNA unwinding by the DEAD box helicase YxiN . Nucleic Acids Research . 37 (13 ), pp. 4464 –4471 . ISSN 0305-1048. doi : 10.1093/nar/gkp397 .Rudolph , M.G. , Wittmann , J.G. and and , Klostermeier D. , 2009 . Crystallization and preliminary characterization of the Thermus thermophilus RNA helicase Hera C-terminal domain . Acta Crystallographica Section F: Structural Biology and Crystallization Communications . 65 (3 ), pp. 248 –252 . ISSN 17443091. doi : 10.1107/S1744309108043145 .Klostermeier , D. and Rudolph , 2009 . A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility . Nucleic Acids Research . 37 (2 ), pp. 421 –430 . ISSN 0305-1048. doi : 10.1093/nar/gkn947 .Gubaev , A. , Hilbert , M. and Klostermeier , D. , 2009 . The DNA-gate of Bacillus subtilis gyrase is predominantly in the closed conformation during the DNA supercoiling reaction . Proceedings of the National Academy of Sciences of the United States of America . 106 (32 ), pp. 13278 –13283 . ISSN 0027-8424. doi : 10.1073/pnas.0902493106 .Aregger , R. and Klostermeier , D. , 2009 . The DEAD Box Helicase YxiN Maintains a Closed Conformation during ATP Hydrolysis . Biochemistry . 48 (45 ), pp. 10679 –10681 . ISSN 0006-2960. doi : 10.1021/bi901278p .Hilbert , M. , Karow , A.R. and Klostermeier , D. , 2009 . The mechanism of ATP-dependent RNA unwinding by DEAD-box proteins . Biological Chemistry . 390 (12 ), pp. 1237 –1250 . ISSN 1431-6730. doi : 10.1515/BC.2009.135 .Klostermeier , Dagmar , Guzy , Lidia and Mihr and Rajah Scheepers , Anja , eds. , 2009 . Wohin mit uns? – Wissenschaftlerinnen und Wissenschaftler der Zukunft . Lausanne : Peter Lang . ISBN 978-3-631-58114-8.2008 Linden , M.L. , Hartmann , R.K. and Klostermeier , D. , 2008 . The putative RNase P motif in the DEAD box helicase Hera is dispensable for efficient interaction with RNA and helicase activity . Nucleic Acids Research . 36 (18 ), pp. 5800 –5811 . ISSN 0305-1048. doi : 10.1093/nar/gkn581 .Del , Toro Duany Y. , Jungblut , S.P. , Schmidt , A.S. and Klostermeier , D. , 2008 . The reverse gyrase helicase-like domain is a nucleotide-dependent switch that is attenuated by the topoisomerase domain . Nucleic Acids Research . 36 (18 ), pp. 5882 –5895 . ISSN 0305-1048. doi : 10.1093/nar/gkn587 .Theissen , B. , Karow , A.R. , Köhler , J. , Gubaev , A. and Klostermeier , D. , 2008 . RNA and ATP cooperatively induce a conformational change in a DEAD box helicase . Proceedings of the National Academy of Sciences of the United States of America . 105 (2 ), pp. 548 –553 . ISSN 0027-8424. doi : 10.1073/pnas.0705488105 .2007 Jungblut , S.P. and Klostermeier , D. , 2007 . Adenosine 5′-O-(3-thio)triphosphate (ATPγS) Promotes Positive Supercoiling of DNA by T. maritima Reverse Gyrase . Journal of Molecular Biology . 371 (1 ), pp. 197 –209 . ISSN 0022-2836. doi : 10.1016/j.jmb.2007.05.031 .Göttler , T. and Klostermeier , D. , 2007 . Dissection of the Nucleotide Cycle of B. subtilis DNA Gyrase and its Modulation by DNA . Journal of Molecular Biology . 367 (5 ), pp. 1392 –1404 . ISSN 0022-2836. doi : 10.1016/j.jmb.2007.01.055 .Karow , A. , Theissen , B. and Klostermeier , D. , 2007 . Authentic interdomain communication in an RNA helicase reconstituted by expressed protein ligation of two helicase domains . The FEBS Journal . 274 (2 ), pp. 463 –473 . ISSN 1742-464X. doi : 10.1111/j.1742-4658.2006.05593.x .2006 2005 2004 Klostermeier , D. , Sears , P. , Wong , C.-H. , Millar , D.P. , Williamson and J.R. , 2004 . A three-fluorophore FRET assay for high-throughput screening of small-molecule inhibitors of ribosome assembly . Nucleic Acids Research . 32 (9 ), pp. 2707 –2715 . ISSN 0305-1048. doi : 10.1093/nar/gkh588 .Dumitru , G. L. , Deuerling , E. , Groemping , Y. , Klostermeier , D. , Restle , T. and Reinstein , J. , 2004 . DafA cycles between the DnaK chaperone system and translational machinery . Journal of Molecular Biology . 339 (5 ), pp. 1179 –1189 . ISSN 0022-2836. doi : 10.1016/j.jmb.2004.04.052 .2002 2001 Klostermeier , D. , Millar and D.P. , 2001 . Time-resolved fluorescence resonance energy transfer: A versatile tool for the analysis of nucleic acids . Biopolymers . 61 (3 ), pp. 159 –179 . ISSN 0006-3525. doi : 10.1002/bip.10146 .Ryder , S.P. , Oyelere , A.K. , Padilla , J. , Klostermeier , D. , Millar , D.P. and Strobel , S.A. , 2001 . Investigation of adenosine base ionization in the hairpin ribozyme by nucleotide analog interference mapping . RNA . 7 (10 ), pp. 1454 –1463 . ISSN 1355-8382.Klostermeier , D. , Millar and D.P. , 2001 . RNA conformation and folding studied with fluorescence resonance energy transfer . Methods . 23 (3 ), pp. 240 –254 . ISSN 1046-2023. doi : 10.1006/meth.2000.1135 .Klostermeier , D. , Millar and D.P. , 2001 . Tertiary structure stability of the hairpin ribozyme in its natural and minimal forms: Different energetic contributions from a ribose zipper motif . Biochemistry . 40 (37 ), pp. 11211 –11218 . ISSN 0006-2960. doi : 10.1021/bi010773f .Brehmer , D. , Ruediger , S. , Gaessler , C. , Klostermeier , D. , Packschies , L. , Reinstein , J. , Mayer. , M.P. and Bukau , B. , 2001 . Tuning of chaperone activity of Hsp70 proteins by modulation of nucleotide exchange . Nature Structural Biology . 8 (5 ), pp. 427 –432 . ISSN 1072-8368. doi : 10.1038/87588 .Grömping , Y. , Klostermeier , D. , Herrmann , C. , Veit , T. , Seidel , R. and Reinstein , J. , 2001 . Regulation of ATPase and chaperone cycle of DnaK from Thermus thermophilus by the nucleotide exchange factor GrpE . Journal of Molecular Biology . 305 (5 ), pp. 1173 –1183 . ISSN 0022-2836. doi : 10.1006/jmbi.2000.4373 .2000 1999 Laufen T. , Mayer , M.P. , Beisel C. , Klostermeier D. , Mogk A. and Reinstein J. , Bukau B. , 1999 . Mechanism of regulation of Hsp70 chaperones by DnaJ cochaperones . Proceedings of the National Academy of Sciences of the United States of America . 96 (10 ), pp. 5452 –5457 . ISSN 0027-8424. doi : 10.1073/pnas.96.10.5452 .Klostermeier , D. , Seidel , R. , Reinstein and J. , 1999 . The functional cycle and regulation of the Thermus thermophilus DnaK chaperone system . Journal of Molecular Biology . 287 (3 ), pp. 511 –525 . ISSN 0022-2836. doi : 10.1006/jmbi.1999.2636 .1998 1997 Klostermeier , D. , Bayer , P. , Kraft , M. , Frank , R.W. , Rösch and P. , 1997 . Spectroscopic investigations of HIV-1 trans-activator and related peptides in aqueous solutions . Biophysical Chemistry . 63 (2-3 ), pp. 87 –96 . ISSN 0301-4622. doi : 10.1016/S0301-4622(96)02243-0 .