Publikationen
- Zander Maximilian, Schmid Jochen, Kabisch Johannes. (). Implementation of Spore Display in Paenibacillus polymyxa with Different Hydrolytic Enzymes. Microorganisms, 12(7), 1438. doi: 10.3390/microorganisms12071438. [unknown status]
- Ravagnan Giulia, Schmid Jochen. (). Promising non-model microbial cell factories obtained by genome reduction. Frontiers in Bioengineering and Biotechnology, 12. doi: 10.3389/fbioe.2024.1427248.
- Julia Schilling, Jochen Schmid. (). Comprehensive rheological analysis of structurally related acetan-like heteroexopolysaccharides from two Kozakia baliensis strains in surfactants and galactomannan blends. New Biotechnology, 82, 75–84. doi: 10.1016/j.nbt.2024.05.003.
- Giulia Ravagnan, Janne Lesemann, Moritz-Fabian Müller, Anja Poehlein, Rolf Daniel, Stephan Noack, Johannes Kabisch and Jochen Schmid. (). Genome reduction in Paenibacillus polymyxa DSM 365 for chassis development. Frontiers in Bioengineering and Biotechnology, 12. doi: 10.3389/fbioe.2024.1378873.
- Meliawati Meliawati, Daniel C. Volke, Pablo I. Nikel, Jochen Schmid . (). Engineering the carbon and redox metabolism of Paenibacillus polymyxa for efficient isobutanol production. Microbial Biotechnology, 17(3), Article e14438. doi: 10.1111/1751-7915.14438.
- Giulia Ravagnan, Meliawati Mekliawati, Jochen Schmid. (). CRISPR-Cas9-Mediated Genome Editing in Paenibacillus polymyxa. In (Eds.), Synthetic Biology, Methods and Protocols (pp. 267–280). New York: Humana Press. doi: 10.1007/978-1-0716-3658-9_16.
- Julia Wünsche, Hannah Brüggemann, Moritz Gansbiller, Jochen Schmid. (). Acetan-like heteropolysaccharide production by various Kozakia baliensis strains: Characterization and further insights. International Journal of Biological Macromolecules, 253(4). doi: 10.1016/j.ijbiomac.2023.127097.
- Christoph Schilling, Moritz Gansbiller, Broder Rühmann, Volker Sieber and Jochen Schmid. (). Rheological characterization of artificial Paenan compositions produced by Paenibacillus polymyxa DSM 365. Carbohydrate Polymers, 320, Article 121243. doi: 10.1016/j.carbpol.2023.121243.
- Wünsche J & Schmid J. (). Acetobacteraceae as exopolysaccharide producers: Current state of knowledge and further perspectives. Frontiers in Bioengineering and Biotechnology, 11:1166618. doi: doi: 10.3389/fbioe.2023.1166618.
- Christoph Schilling, Leesa J. Klau, Finn L. Aachmann, Broder Rühmann, Jochen Schmid, Volker Sieber. (). CRISPR-Cas9 driven structural elucidation of the heteroexopolysaccharides from Paenibacillus polymyxa DSM 365. Carbohydrate Polymers, 120763. doi: 10.1016/j.carbpol.2023.120763.
- Meliawati Meliawati, Gansbiller Moritz, Schmid Jochen. (). Hyaluronic Acid (Hyaluronan). In (Eds.), Microbial Production of High-Value Products (pp. 159–184). Cham: Springer Nature. doi: 10.1007/978-3-031-06600-9_7.
- Meliawati Meliawati, Tobias May, Jeanette Eckerlin, Daniel Heinrich, Andrea Herold, Jochen Schmid. (). Insights in the complex DegU, DegS, Spo0A regulation system of Paenibacillus polymyxa by CRISPR-Cas9-based targeted point mutations. Applied and Environmental Microbiology, 88(11), e00164-2. doi: 10.1128/aem.00164-22.
- M. Mweliawati, C. Teckentrup, J. Schmid. (). CRISPR-Cas9-mediated Large Cluster Deletion and Multiplex Genome Editing in Paenibacillus polymyxa. ACS Synthetic Biology, 2022(11 / 1), 77–84. doi: 10.1021/acssynbio.1c00565.
- Schilling C, Klau LJ, Aachmann FL, Rühmann B, Schmid J, Sieber V,. (). Structural elucidation of the fucose containing polysaccharide of Paenibacillus polymyxa DSM 365. Carbohydrate Polymers, 2022(278), Article 118951. doi: 10.1016/j.carbpol.2021.118951.
- Blombach B, Grünberger A, Centler F, Wierckx N & Schmid J. (). Exploiting unconventional prokaryotic hosts for industrial biotechnology. Trends in Biotechnology, 40(4), 385–397. doi: 10.1016/j.tibtech.2021.08.003.
- Rath T, Rühmann B, Schmid J & Sieber V. (). Systematic optimization of exopolysaccharide production by Gluconacetobacter sp. and use of (crude) glycerol as carbon source. Carbohydrate Polymers, 276, 118769. doi: 10.1016/j.carbpol.2021.118769.
- Meliawati M, Teckentrup C & Schmid J. (). CRISPR-Cas9-mediated Large Cluster Deletion and Multiplex Genome Editing in Paenibacillus polymyxa. bioRxiv, 2021. doi: 10.1101/2021.08.06.455192.
- Meliawati M, Schilling C & Schmid J. (). Recent advances of Cas12a applications in bacteria. Applied Microbiology and Biotechnology, 105, 2981–2990. doi: 10.1007/s00253-021-11243-9.
- Medina-Cabrera EV, Gansbiller M, Rühmann B, Schmid J & Sieber V. (). Rheological characterization of Porphyridium sordidum and Porphyridium purpureum exopolysaccharides. Carbohydrate Polymers, 253, 117237. doi: 10.1016/j.carbpol.2020.117237.
- Schilling C, Koffas M, Sieber V & Schmid J. (). Novel prokaryotic CRISPR-Cas12a based tool for programmable transcriptional activation and repression. ACS Synthetic Biology, 9(12), 3353–3363. doi: 10.1021/acssynbio.0c00424.
- Schilling Christoph, Badri Abinaya, Sieber Volker, Koffas Mattheos, Schmid Jochen. (). Metabolic engineering for production of functional polysaccharides. Current Opinion in Biotechnology, 66, 44–51. doi: 10.1016/j.copbio.2020.06.010.
- Schilling C, Ciccone R & Sieber V and Schmid J. (). Engineering of the 2,3-butanediol pathway of Paenibacillus polymyxa DSM 365. Metabolic Engineering, xx. doi: 10.1016/j.ymben.2020.07.009.
- Sieber V & Schmid J and Hublik G. (). Microbial Polysaccharides. In (Eds.), Industrial Microbiology (pp. 279–299). John Wiley & Sons.
- Medina-Cabrera V E, Rühmann B, Schmid J & Sieber V. (). Characterization and comparison of Porphyridium sordidum and Porphyridium purpureum concerning growth characteristics and polysaccharide production. Algal Research, 49, 101931. doi: 10.1016/j.algal.2020.101931.
- Medina-Cabrera EV, Rühmann B, Schmid J & Sieber V. (). Optimization of growth and EPS production in two Porphyridum strains. Bioresource Technology Reports, 11, 100486. doi: 10.1016/j.biteb.2020.100486.
- Gansbiller M, Schmid J & Sieber V. (). Rheology of sphingans in EPS-surfactant systems. Carbohydrate Polymers, 248, 116778. doi: 10.1016/j.carbpol.2020.116778.
- Schmid J. (). Engineering of Microbial Polysaccharide Structures. In (Ed.), Microbial Exopolysaccharides: Current Research and Developments (pp. 83–98). UK: Caister Academic Press. doi: 10.21775/9781912530267.04.
- Schäper S, Wendt H, Bamberger J, Sieber V, Schmid J & Becker A. (). A bifunctional UDP-sugar 4-epimerase supports biosynthesis of multiple cell surface polysaccharides in Sinorhizobium meliloti. Journal of Bacteriology, 201. doi: 10.1128/jb.00801-18.
- Gansbiller M, Schmid J & Sieber V. (). In-depth rheological characterization of genetically modified xanthan-variants. Carbohydrate Polymers, 213, 236–246. doi: 10.1016/j.carbpol.2019.02.055.
- Valdez A L, Babot J D, Delgado O D & Fariña I J. (). Scleroglucan Production by Sclerotium rolfsii ATCC 201126 from Amylaceous and Sugarcane Molasses-Based Media: Promising Insights for Sustainable and Ecofriendly Scaling-Up. Journal of Polymers and the Environment, 27. doi: 10.1007/s10924-019-01546-4.
- Schmid J & Sieber V. (). The Bacterial Glycome: From Monomers to Complex Carbohydrate Polymers. In (Ed.), Encyclopedia of Microbiology (Fourth Edition) (pp. 409–415). Elsevier. doi: 10.1016/b978-0-12-809633-8.90774-x.
- Harnisch F, Bahnemann J, Buyel J, Centler F, Classen T, Dohnt K, Ebert E B, Eyer K, Grünberger A, Jandt U, Jung S, Kara S, Krujatz F, Link H, Regestein L, Schmid J & Tischler D. (). Rechte und Pflichten von akademischen Nachwuchsführungskräften.: DECHEMA.
- Schmid J & Sieber V. (). Fermentative Production of Microbial Exopolysaccharides. In (Eds.), Bioprocessing for Biomolecules Production (p. 00). unbekannt / n.a. / unknown. doi: 10.1002/9781119434436.ch7.
- Schmid J, Rühmann B, Sieber V, Romero-Jiménez L, Sanjuán J, Pérez-Mendoza D . (). Screening of c-di-GMP-Regulated Exopolysaccharides in Host Interacting Bacteria. In (Ed.), Host-Pathogen Interactions: Methods and Protocols (pp. 263–275). Springer VDI Verlag. doi: 10.1007/978-1-4939-7604-1_21.
- Rütering M, Schmid J, Gansbiller M, Braun A, KLeinen J, Schilling M & Sieber V. (). Rheological characterization of the exopolysaccharide Paenan in surfactant systems. Carbohydrate Polymers, 181, 719–726. doi: 10.1016/j.carbpol.2017.11.086.
- Schmid J. (). Recent insights in microbial exopolysaccharide biosynthesis and engineering strategies. Current Opinion in Biotechnology, 53, 130–136. doi: 10.1016/j.copbio.2018.01.005.
- Schmid J. (). Divining sugar substrates. Nature Chemical Biology, 14, 1071–1072. doi: 10.1038/s41589-018-0165-6.
- Koenig S, Rühmann B, Sieber V & Schmid J. (). Quantitative assay of β-(1,3)–β-(1,6)–glucans from fermentation broth using aniline blue. Carbohydrate Polymers, 174, 57–64. doi: 10.1016/j.carbpol.2017.06.047.
- Harnisch F & Schmid J. (). Editorial to Special Issue of Engineering in Life Sciences Emerging biotechnologies viewed by emerging bioengineers (EBEB). Engineering in Life Sciences, 17(1), 4–5. doi: 10.1002/elsc.201600235.
- Rütering M, Cress BF, Schilling M, Rühmann B, Koffas MAG, Sieber V & Schmid J. (). Tailor-made exopolysaccharides - CRISPR-Cas9 mediated genome editing in Paenibacillus polymyxa. Synthetic Biology, 2(1), ysx007. doi: 10.1093/synbio/ysx007.
- Schmid J & Harnisch F. (). Das neue Wissenschaftszeitvertragsgesetz: Intention und Status quo!? BIOspektrum, 23(2), 119–119. doi: 10.1007/s12268-017-0773-9.
- Funk I, Rimmel N, Schorsch C, Sieber V & Schmid J. (). Production of dodecanedioic acid via biotransformation of low cost plant-oil derivatives using Candida tropicalis. Journal of Industrial Microbiology & Biotechnology, 44(10), 1491–1502. doi: 10.1007/s10295-017-1972-6.
- Funk I, Sieber V & Schmid J. (). Effects of glucose concentration on 1,18-cis-octadec-9-enedioic acid biotransformation efficiency and lipid body formation in Candida tropicalis. Scientific Reports, 7(1). doi: 10.1038/s41598-017-14173-7.
- (Eds.). (). Microbial Exopolysaccharides: From Genes to Applications.: Frontiers Media. doi: 10.3389/978-2-88919-843-6.
- Schmid J, Fariña I J & Rehm B and Sieber V. (). Editorial: Microbial Exopolysaccharides: From Genes to Applications. Frontiers in Microbiology, 6. doi: 10.3389/fmicb.2016.00308.
- Schmid J, Heider D, Wendel J N & Sperl N and Sieber V. (). Bacterial Glycosyltransferases: Challenges and Opportunities of a Highly Diverse Enzyme Class Toward Tailoring Natural Products. Frontiers in Microbiology, 7, 182. doi: 10.3389/fmicb.2016.00182.
- Rühmann B, Schmid J & Sieber V. (). Automated Modular High Throughput Exopolysaccharide Screening Platform Coupled with Highly Sensitive Carbohydrate Fingerprint Analysis. Journal of Visual Experiments, 110, e53249. doi: 10.3791/53249.
- Pick A & Schmid J. (). Katalytische Kaskadenreaktionen. Chemie Ingenieur Technik, 88(9), 1385–1385. doi: 10.1002/cite.201650471.
- Funk I, Schmid J & Sieber V. (). Enhanced Bioconversion Efficiency of Fatty Acids towards α,ω‐Dicarboxylic Acids via Bioprocess Engineering. Chemie Ingenieur Technik, 88(9), 1243–1243. doi: 10.1002/cite.201650097.
- Schmid J. (). Development of a Chassis Organism for the Heterologous Expression of Exopolysaccharide-Encoding Operons. Chemie Ingenieur Technik, 88(9), 1393–1393. doi: 10.1002/cite.201650383.
- Rütering M, Schmid J, Rühmann B, Schilling M & Sieber V. (). Controlled production of polysaccharides-exploiting nutrient supply for levan and heteropolysaccharide formation in Paenibacillus sp. Carbohydrate Polymers, 148, 326–334. doi: 10.1016/j.carbpol.2016.04.074.
- Schmid J, Huptas C & Wenning M. (). Draft Genome Sequence of the Xanthan Producer Xanthomonas campestris LMG 8031. Genome Announcements, 4(5), e01069–16. doi: 10.1128/genomea.01069-16.
- Pick A, Beer B, Hemmi R, MommaR, Schmid J & Miyamoto K and Sieber V. (). Identification and characterization of two new 5-keto-4-deoxy-D-Glucarate Dehydratases/Decarboxylases. BMC Biotechnology, 16 (80). doi: 10.1186/s12896-016-0308-3.
- Loscar E M, Huptas C, Wenning M & Sieber V and Schmid J. (). Draft Genome Sequence of Lysinibacillus xylanilyticus SR-86. Genome Announcements, 4(6). doi: 10.1128/genomea.01317-16.
- Rühmann B, Schmid J & Sieber V. (). Methods to identify the unexplored diversity of microbial exopolysaccharides. Frontiers in Microbiology, 6, 565. doi: 10.3389/fmicb.2015.00565.
- Schmid J & Muffler K. (). Green genetic engineering - The rationale of an opportunity, Grüne Gentechnologie? der Ratio eine Chance. BIOspektrum, 21(4), 367. doi: 10.1007/s12268-015-0586-7.
- Schmid J, Sieber V & Rehm B. (). Bacterial exopolysaccharides: biosynthesis pathways and engineering strategies. Frontiers in Microbiology, 6, 496. doi: 10.3389/fmicb.2015.00496.
- Rühmann B, Schmid J & Sieber V. (). High throughput exopolysaccharide screening platform: from strain cultivation to monosaccharide composition and carbohydrate fingerprinting in one day. Carbohydrate Polymers, 122, 212–220. doi: 10.1016/j.carbpol.2014.12.021.
- Schmid J & Sieber V. (). Enzymatic transformations involved in the biosynthesis of microbial exo-polysaccharides based on the assembly of repeat units. ChemBioChem, 16, 1141–1147. doi: 10.1002/cbic.201500035.
- Schmid J & Muffler K. (). Grüne Gentechnologie - der Ratio eine Chance. BIOspektrum, 21(4), 367–367. doi: 10.1007/s12268-015-0586-7.
- Pick A, Schmid J & Sieber V. (). Characterization of uronate dehydrogenases catalysing the initial step in an oxidative pathway. Microbial Biotechnology, 8(4), 633–643. doi: 10.1111/1751-7915.12265.
- Reese J, Sieber V, Plank J, Sperl N & Schmid J. (). Effect of biotechnologically modified alginates on LDH structures. Bioinspired, Biomimetic and Nanobiomaterials, 4(3), 174–186. doi: 10.1680/bbn.14.00032.
- Blombach B, Castiglione K, Haarmann T & Schmid J. (). Trends in der Genomeditierung für die industrielle Biotechnologie. BIOspektrum, 21(7), 788–790. doi: 10.1007/s12268-015-0645-0.
- Schmid J, Koenig S, Pick A, Steffler F, Yoshida S, Miyamoto K, and Sieber V. (). Draft Genome Sequence of Kozakia baliensis SR-745, the First Sequenced Kozakia Strain from the Family Acetobacteraceae. Genome Announcements, 2(3), e00594–14. doi: 10.1128/genomea.00594-14.
- Schmid J, Koenig S, Rühmann B, Rütering M & Sieber V. (). Biosynthese und Genomik mikrobieller Polysaccharide. BIOspektrum, 20(3), 288–290. doi: 10.1007/s12268-014-0443-0.
- Rühmann B, Schmid J & Sieber V. (). Fast carbohydrate analysis via liquid chromatography coupled with ultra violet and electrospray ionization ion trap detection in 96-well format. Journal of Chromatography A, 1350, 44–50. doi: 10.1016/j.chroma.2014.05.014.
- Schmid J, Sperl N & Sieber V. (). A comparison of genes involved in sphingan biosynthesis brought up to date. Applied Microbiology and Biotechnology, 98, 7719–7733. doi: 10.1007/s00253-014-5940-z.
- Pick A, Ott W, Howe T, Schmid J & Sieber V. (). Improving the NADH-cofactor specificity of the highly active AdhZ3 and AdhZ2 from Escherichia coli K-12. Journal of Biotechnology, 189, 157–165. doi: 10.1016/j.jbiotec.2014.06.015.
- Schmid J, Mueller-Hagen D, Sieber V & Meyer V. (). Nucleic and Protein Extraction Methods for Fungal Exopolysaccharide Producers. In (Eds.), Laboratory Protocols in Fungal Biology (pp. 427–434). New York: Springer VDI Verlag. doi: 10.1007/978-1-4614-2356-0_39.
- Pick A, Rühmann B, Schmid J & Sieber V. (). Novel CAD-like enzymes from Escherichia coli K-12 as additional tools in chemical production. Applied Microbiology and Biotechnology, 97(13), 5815–5824. doi: 10.1007/s00253-012-4474-5.
- Schmid J, Meyer V & Sieber V. (). Scleroglucan: biosynthesis, production and application of a versatile hydrocolloid. Applied Microbiology and Biotechnology, 91(4), 937–947. doi: 10.1007/s00253-011-3438-5.
- Schmid J, Mueller-Hagen D, Bekel T, Funk L, Stahl U, Sieber V & Meyer V. (). Transcriptome sequencing and comparative transcriptome analysis of the scleroglucan producer Sclerotium rolfsii. BMC Genomics, 11. doi: 10.1186/1471-2164-11-329.
- Schmid J, Stahl U & Meyer V. (). Genetic and Metabolic Engineering in Filamentous Fungi. In (Ed.), Mycota XV: Physiology and Genetics: SELECTED BASIC AND APPLIED ASPECTS (pp. 377–392). Berlin - Heidelberg: Springer VDI Verlag. doi: 10.1007/978-3-642-00286-1_18.
- Schwartlander R, Schmid J, Brandenburg B, Katenz E, Wolfgang F, Vondran R, Pless G, Cheng X, Pascher A, Neuhaus P & Sauer IM. (). Continuously microscopically observed and process-controlled cell culture within the SlideReactor: Proof of a new concept for cell characterization. Tissue Engineering, 13(1), 187–196. doi: 10.1089/ten.2006.0071.
- Schwartlander R, Schmid J, Katenz E, Cheng X, Pless G, Modest D, Vondran F, Neuhaus P & Sauer I. (). The slidereactor - Proof of concept. International Journal of Artificial Organs, 29(5), 519.
- Schwartlander R, Schmid J, Katenz E, Cheng X, Pless G, Gong X, Vondran F, Neuhaus P & Sauer IM. (). The slidereactor - Evaluation of a hollow fiber based bioreactor suitable for light microscopy. International Journal of Artificial Organs, 28(9), 887. doi: 10.1111/j.1525-1594.2005.29049.x.
- Sauer I, Schwartlander R, Schmid J, Efimova E, Vondran F, Kehr D, Pless G, Spinelli A, Brandenburg B, Hildt E & Neuhaus P. (). The SlideReactor - A simple hollow fiber based bioreactor suitable for light microscopy. Artificial Organs, 29(3), 264–267. doi: 10.1111/j.1525-1594.2005.29049.x.