Extract identifications
Extract identifications
Description
Extract identified peptides and proteins from PSM list files.
Input files
- at least 1 OMSSA results file (.csv)
Output files
This is a converter script which produces a identifications file for every input OMSSA results file.
Context
Parameters
- Scope
- Specify whether peptides or proteins should be extracted.
Choices: peptide (default), protein
Source code
psm-extract-identifications.rb, psm-extract-identifications.yaml (GitHub)