Patchy peptides
Patchy peptides
Description
This script stitches de novo predictions together, thus creating patchy peptides.
Input files
- at least 1 PEAKS de novo peptide file (.fa | .faa | .fas | .fasta)
Output files
- CSV results (patchy-peptides.csv)
- FASTA results (patchy-peptides.fasta)
Context
Parameters
- Minimum overlap
-
Default: 3
- Minimum PEAKS score
-
Default: 10.0 %
Source code
patchy-peptides.rb, patchy-peptides.yaml (GitHub)