Convert PSM lists to AMS
Contents
Convert PSM lists to AMS
Description
Convert a PSM list to the AMS file format for use with 2DB.
Input files
- at least 1 OMSSA results file (.csv)
- optional: spectra files (.mzdata | .mzdata.bz2 | .mzdata.gz | .mzdata.zip | .mzml | .mzml.bz2 | .mzml.gz | .mzml.zip | .mzxml | .mzxml.bz2 | .mzxml.gz | .mzxml.zip | .xml | .xml.bz2 | .xml.gz | .xml.zip)
Output files
This is a converter script which produces a AMS file file for every input OMSSA results file.
Context
No context information available.
Source code
export-psm-to-ams.rb, export-psm-to-ams.yaml (GitHub)