Compare OMSSA PSM lists
Compare OMSSA PSM lists
Description
Compare cropped OMSSA peptide-spectral matches.
Input files
- at least 1 PSM list file (.csv)
Output files
- HTML report (compare-omssa-report.html)
- CSV report (compare-omssa-report.csv)
Context
Parameters
- List safe proteins only
- Safe proteins have been identified by at least two distinct peptides or by at least one GPF peptide
Default: false
- Add peptides to HTML report
-
Default: false
- Add peptides to CSV report
- If this flag is checked, the distinct peptide columns will be omitted.
Default: false
Source code
compare-omssa.rb, compare-omssa.yaml (GitHub)